Korkola, James E: search on Z-Library

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1

Cross-platform pathway-based analysis identifies markers of response to the PARP inhibitor olaparib

Anneleen Daemen, Denise M. Wolf, James E. Korkola, Obi L. Griffith, Jessica R. Frankum, Rachel Brough, Lakshmi R. Jakkula, Nicholas J. Wang, Rachael Natrajan, Jorge S. Reis-Filho, Christopher J. Lord,

Journal:

Breast Cancer Research and Treatment

Year:

2012

Language:

english

File:

PDF, 538 KB

english, 2012

2

Testicular mixed germ cell tumors: a morphological and immunohistochemical study using stem cell markers, OCT3/4, SOX2 and GDF3, with emphasis on morphologically difficult-to-classify areas

Gopalan, Anuradha, Dhall, Deepti, Olgac, Semra, Fine, Samson W, Korkola, James E, Houldsworth, Jane, Chaganti, Raju S, Bosl, George J, Reuter, Victor E, Tickoo, Satish K

Journal:

Modern Pathology

Year:

2009

Language:

english

File:

PDF, 785 KB

english, 2009

3

Expanding the Diversity of Imaging-Based RNAi Screen Applications Using Cell Spot Microarrays

Rantala, Juha, Kwon, Sunjong, Korkola, James, Gray, Joe

Journal:

Year:

2013

Language:

english

File:

PDF, 1017 KB

english, 2013

4

Clonality of lobular carcinoma in situ and synchronous invasive lobular carcinoma

E. Shelley Hwang, Sarah J. Nyante, Yunn Yi Chen, Dan Moore, Sandy DeVries, James E. Korkola, Laura J. Esserman, Frederic M. Waldman

Journal:

Year:

2004

Language:

english

File:

PDF, 323 KB

english, 2004

5

Genome co-amplification upregulates a mitotic gene network activity that predicts outcome and response to mitotic protein inhibitors in breast cancer

Hu, Zhi, Mao, Jian-Hua, Curtis, Christina, Huang, Ge, Gu, Shenda, Heiser, Laura, Lenburg, Marc E., Korkola, James E., Bayani, Nora, Samarajiwa, Shamith, Seoane, Jose A., A. Dane, Mark, Esch, Amanda, F

Journal:

Breast Cancer Research

Year:

2016

Language:

english

File:

PDF, 2.13 MB

english, 2016

6

Mechanism and Role of SOX2 Repression in Seminoma: Relevance to Human Germline Specification

Kushwaha, Ritu, Jagadish, Nirmala, Kustagi, Manjunath, Mendiratta, Geetu, Seandel, Marco, Soni, Rekha, Korkola, James E., Thodima, Venkata, Califano, Andrea, Bosl, George J., Chaganti, R.S.K.

Journal:

Stem Cell Reports

Year:

2016

Language:

english

File:

PDF, 4.07 MB

english, 2016

7

Optimizing stringency for expression microarrays

Korkola, James E., Estep, Anne L.H., Pejavar, Sunanda, DeVries, Sandy, Jensen, Ronald, Waldman, Frederic M.

Journal:

Year:

2003

Language:

english

File:

PDF, 514 KB

english, 2003

8

Constitutive Gene Expression Predisposes Morphogen-Mediated Cell Fate Responses of NT2/D1 and 27X-1 Human Embryonal Carcinoma Cells

Rajendrakumar S. V. Chadalavada, James E. Korkola, Jane Houldsworth, Adam B. Olshen, George J. Bosl, Lorenz Studer, R. S. K. Chaganti

Journal:

Year:

2007

Language:

english

File:

PDF, 375 KB

english, 2007

9

Mapping cancer signaling networks by an integrated multiplexed tissue imaging platform

Roberts, Esteban, Jacob, Thomas, Garsha, Karl, Ramunno-Johnson, Damien, Ventura, Franklin, Korkola, James, Ashworth-Sharpe, Julia, Johnson, Donald, Corless, Christopher L., Troxell, Megan, Barnes, Mic

Journal:

Year:

2016

Language:

english

File:

PDF, 3.69 MB

english, 2016

10

Crosstalk between invadopodia and the extracellular matrix

Iizuka, Shinji, Leon, Ronald P., Gribbin, Kyle P., Zhang, Ying, Navarro, Jose, Smith, Rebecca, Devlin, Kaylyn, Wang, Lei G., Gibbs, Summer L., Korkola, James, Nan, Xiaolin, Courtneidge, Sara A.

Journal:

European Journal of Cell Biology

Year:

2020

File:

PDF, 11.70 MB

2020

11

A Genetic Strategy for Single and Combinatorial Analysis of miRNA Function in Mammalian Hematopoietic Stem Cells

Eirini P. Papapetrou, James E. Korkola, Michel Sadelain

Journal:

Year:

2010

Language:

english

File:

PDF, 790 KB

english, 2010

12

Exome Sequencing of Cell-Free DNA from Metastatic Cancer Patients Identifies Clinically Actionable Mutations Distinct from Primary Disease

Butler, Timothy M., Johnson-Camacho, Katherine, Peto, Myron, Wang, Nicholas J., Macey, Tara A., Korkola, James E., Koppie, Theresa M., Corless, Christopher L., Gray, Joe W., Spellman, Paul T., Richard

Journal:

Year:

2015

Language:

english

File:

PDF, 1.46 MB

english, 2015

13

Interferon-α Resistance Associated Genes in Renal Cell Carcinoma Identified by Expression Profiling

Korkola, James E., Kondagunta, G. Varuni, Reuter, Victor E., Motzer, Robert J., Chaganti, R.S.K.

Journal:

The Journal of Urology

Year:

2007

Language:

english

File:

PDF, 2.09 MB

english, 2007

14

Quantification of sensitivity and resistance of breast cancer cell lines to anti-cancer drugs using GR metrics

Hafner, Marc, Heiser, Laura M., Williams, Elizabeth H., Niepel, Mario, Wang, Nicholas J., Korkola, James E., Gray, Joe W., Sorger, Peter K.

Journal:

Scientific Data

Year:

2017

Language:

english

File:

PDF, 1.31 MB

english, 2017

15

Modeling precision treatment of breast cancer

Daemen, Anneleen, Griffith, Obi L, Heiser, Laura M, Wang, Nicholas J, Enache, Oana M, Sanborn, Zachary, Pepin, Francois, Durinck, Steffen, Korkola, James E, Griffith, Malachi, Hur, Joe S, Huh, Nam, Ch

Journal:

Year:

2013

Language:

english

File:

PDF, 1.44 MB

english, 2013

16

Gene expression-based classification of nonseminomatous male germ cell tumors

Korkola, James E, Houldsworth, Jane, Dobrzynski, Debbie, Olshen, Adam B, Reuter, Victor E, Bosl, George J, Chaganti, R S K

Journal:

Year:

2005

Language:

english

File:

PDF, 451 KB

english, 2005

17

Cyclin D1expression during rat mammary tumor development and its potential role in the resistance of the Copenhagen rat

James E Korkola, Geoffrey A Wood, Michael C Archer

Journal:

Breast Cancer Research

Year:

1999

Language:

english

File:

PDF, 2.45 MB

english, 1999

18

Erratum to: Modeling precision treatment of breast cancer

Daemen, Anneleen, Griffith, Obi L, Heiser, Laura M, Wang, Nicholas J, Enache, Oana M, Sanborn, Zachary, Pepin, Francois, Durinck, Steffen, Korkola, James E, Griffith, Malachi, Hur, Joe S, Huh, Nam, Ch

Journal:

Year:

2015

Language:

english

File:

PDF, 327 KB

english, 2015

19

Kinome rewiring reveals AURKA limits PI3K-pathway inhibitor efficacy in breast cancer

Donnella, Hayley J., Webber, James T., Levin, Rebecca S., Camarda, Roman, Momcilovic, Olga, Bayani, Nora, Shah, Khyati N., Korkola, James E., Shokat, Kevan M., Goga, Andrei, Gordan, John D., Bandyopad

Journal:

Nature Chemical Biology

Year:

2018

Language:

english

File:

PDF, 3.09 MB

english, 2018

20

Breast cancer genomes — form and function

James Korkola, Joe W Gray

Journal:

Current Opinion in Genetics & Development

Year:

2010

Language:

english

File:

PDF, 571 KB

english, 2010

21

CCR5 governs DNA damage and breast cancer stem cell expansion

Jiao, Xuanmao, Velasco-Velázquez, Marco A, Wang, Min, Li, Zhiping, Rui, Hallgeir, Peck, Amy R, Korkola, James E, Chen, Xuelian, Xu, Shaohua, DuHadaway, James B., Guerrero-Rodriguez, Sandra, Addya, San

Journal:

Cancer Research

Year:

2018

Language:

english

File:

PDF, 2.14 MB

english, 2018

22

Maintenance of MYC expression promotes de novo resistance to BET bromodomain inhibition in castration-resistant prostate cancer

Coleman, Daniel J., Gao, Lina, Schwartzman, Jacob, Korkola, James E., Sampson, David, Derrick, Daniel S., Urrutia, Joshua, Balter, Ariel, Burchard, Julja, King, Carly J., Chiotti, Kami E., Heiser, Lau

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 2.17 MB

english, 2019

23

OUTCOME PREDICTION IN BLADDER CANCER USING OLIGONUCLEOTIDE MICROARRAYS

Koppie, Theresa M, Korkola, James E, Olgac, Semra, Bochner, Bernard H, Cordon-Cardo, Carlos

Journal:

The Journal of Urology

Year:

2008

Language:

english

File:

PDF, 125 KB

english, 2008

24

Cyclin D1 is necessary but not sufficient for anchorage-independent growth of rat mammary tumor cells and is associated with resistance of the Copenhagen rat to mammary carcinogenesis

Li, You-Jun, Song, Runlan, Korkola, James E, Archer, Michael C, Ben-David, Yaacov

Journal:

Year:

2003

Language:

english

File:

PDF, 383 KB

english, 2003

25

Enzalutamide response in a panel of prostate cancer cell lines reveals a role for glucocorticoid receptor in enzalutamide resistant disease

Smith, Rebecca, Liu, Moqing, Liby, Tiera, Bayani, Nora, Bucher, Elmar, Chiotti, Kami, Derrick, Daniel, Chauchereau, Anne, Heiser, Laura, Alumkal, Joshi, Feiler, Heidi, Carroll, Peter, Korkola, James E

Journal:

Scientific Reports

Year:

2020

File:

PDF, 4.25 MB

2020

26

Molecular events in germ cell tumours: linking chromosome-12 gain, acquisition of pluripotency and response to cisplatin

James E. Korkola, Jane Houldsworth, George J. Bosl, R.S.K. Chaganti

Journal:

BJU International

Year:

2009

Language:

english

File:

PDF, 134 KB

english, 2009

27

A Multi-center Study on the Reproducibility of Drug-Response Assays in Mammalian Cell Lines

Niepel, Mario, Hafner, Marc, Mills, Caitlin E., Subramanian, Kartik, Williams, Elizabeth H., Chung, Mirra, Gaudio, Benjamin, Barrette, Anne Marie, Stern, Alan D., Hu, Bin, Korkola, James E., Gray, Joe

Journal:

Year:

2019

Language:

english

File:

PDF, 3.92 MB

english, 2019

28

Automatic Transformation and Integration to Improve Visualization and Discovery of Latent Effects in Imaging Data

Hunt, Gregory J., Dane, Mark A., Korkola, James E., Heiser, Laura M., Gagnon-Bartsch, Johann A.

Journal:

Journal of Computational and Graphical Statistics

Year:

2020

Language:

english

File:

PDF, 1.33 MB

english, 2020

29

Transcriptional Program Associated with IFN- α Response of Renal Cell Carcinoma

Banerjee, Debendranath, Chadalavada, Rajendrakumar S.V., Bourdon, Veronique, Korkola, James E., Motzer, Robert J., Chaganti, R.S.K.

Journal:

Journal of Interferon & Cytokine Research

Year:

2006

Language:

english

File:

PDF, 347 KB

english, 2006

30

Disentangling Multidimensional Spatio-Temporal Data into Their Common and Aberrant Responses

Chang, Young Hwan, Korkola, James, Amin, Dhara N., Moasser, Mark M., Carmena, Jose M., Gray, Joe W., Tomlin, Claire J., Lisacek, Frederique

Journal:

Year:

2015

Language:

english

File:

PDF, 1.98 MB

english, 2015

31

Identification of a robust gene signature that predicts breast cancer outcome in independent data sets

James E Korkola, Ekaterina Blaveri, Sandy DeVries, Dan H Moore, E Shelley Hwang, Yunn-Yi Chen, Anne LH Estep, Karen L Chew, Ronald H Jensen, Frederic M Waldman

Journal:

Year:

2007

Language:

english

File:

PDF, 1.01 MB

english, 2007

32

Using Microarrays to Interrogate Microenvironmental Impact on Cellular Phenotypes in Cancer

Smith, Rebecca, Devlin, Kaylyn, Kilburn, David, Gross, Sean, Sudar, Damir, Bucher, Elmar, Nederlof, Michel, Dane, Mark, Gray, Joe W., Heiser, Laura, Korkola, James E.

Journal:

Journal of Visualized Experiments

Year:

2019

Language:

english

File:

PDF, 585 KB

english, 2019

33

Transcriptional signatures in histologic structures within glioblastoma tumors may predict personalized drug sensitivity and survival

Kersch, Cymon N, Claunch, Cheryl J, Ambady, Prakash, Bucher, Elmar, Schwartz, Daniel L, Barajas, Ramon F, Iliff, Jeffrey J, Risom, Tyler, Heiser, Laura, Muldoon, Leslie L, Korkola, James E, Gray, Joe

Journal:

Neuro-Oncology Advances

Year:

2020

File:

PDF, 1.46 MB

2020

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